mirror of
https://github.com/hanzo-ds/connect.git
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* drop pytz dependency and only make backports.zoneinfo required prior to the introduction of zoneinfo in the standard library because pytz docs mention that it shouldnt be required anymore and it is always good to cut back on uneeded 3rd party dependencies * some consistency updates * addressing review comments * don't mutate callers column_tzs * minor tweaks --------- Co-authored-by: Joe Spadola <[email protected]>
442 lines
18 KiB
Python
442 lines
18 KiB
Python
import logging
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import re
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from collections.abc import Generator, Sequence
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from datetime import timezone, tzinfo
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from io import IOBase
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from typing import TYPE_CHECKING, Any, BinaryIO, Literal
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from zoneinfo import ZoneInfoNotFoundError
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from clickhouse_connect.driver import tzutil
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from clickhouse_connect.driver.binding import bind_query
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from clickhouse_connect.driver.common import StreamContext, dict_copy, empty_gen, get_rename_method
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from clickhouse_connect.driver.context import BaseQueryContext
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from clickhouse_connect.driver.exceptions import ProgrammingError, StreamClosedError
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from clickhouse_connect.driver.external import ExternalData
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from clickhouse_connect.driver.options import check_arrow
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from clickhouse_connect.driver.types import Closable, Matrix
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if TYPE_CHECKING:
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from clickhouse_connect.datatypes.base import ClickHouseType
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logger = logging.getLogger(__name__)
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TzMode = Literal["naive_utc", "aware", "schema"]
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TzSource = Literal["auto", "server", "local"]
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_VALID_TZ_MODES = {"naive_utc", "aware", "schema"}
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_VALID_TZ_SOURCES = {"auto", "server", "local"}
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commands = "CREATE|ALTER|SYSTEM|GRANT|REVOKE|CHECK|DETACH|ATTACH|DROP|DELETE|KILL|OPTIMIZE|SET|RENAME|TRUNCATE|USE|UPDATE"
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limit_re = re.compile(r"\s+LIMIT($|\s)", re.IGNORECASE)
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select_re = re.compile(r"(^|\s)SELECT\s", re.IGNORECASE)
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insert_re = re.compile(r"(^|\s)INSERT\s*INTO", re.IGNORECASE)
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command_re = re.compile(r"(^\s*)(" + commands + r")\s", re.IGNORECASE)
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class QueryContext(BaseQueryContext):
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"""
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Argument/parameter object for queries. This context is used to set thread/query specific formats
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"""
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def __init__(
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self,
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query: str | bytes = "",
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parameters: dict[str, Any] | None = None,
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settings: dict[str, Any] | None = None,
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query_formats: dict[str, str] | None = None,
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column_formats: dict[str, str | dict[str, str]] | None = None,
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encoding: str | None = None,
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server_tz: tzinfo = timezone.utc,
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use_none: bool | None = None,
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column_oriented: bool | None = None,
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use_numpy: bool | None = None,
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max_str_len: int | None = 0,
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query_tz: str | tzinfo | None = None,
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column_tzs: dict[str, str | tzinfo] | None = None,
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use_extended_dtypes: bool | None = None,
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as_pandas: bool = False,
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streaming: bool = False,
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apply_server_tz: bool = False,
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external_data: ExternalData | None = None,
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transport_settings: dict[str, str] | None = None,
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rename_response_column: str | None = None,
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tz_mode: TzMode | None = None,
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):
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"""
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Initializes various configuration settings for the query context
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:param query: Query string with Python style format value replacements
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:param parameters: Optional dictionary of substitution values
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:param settings: Optional ClickHouse settings for the query
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:param query_formats: Optional dictionary of query formats with the key of a ClickHouse type name
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(with * wildcards) and a value of valid query formats for those types.
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The value 'encoding' can be sent to change the expected encoding for this query, with a value of
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the desired encoding such as `latin-1`
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:param column_formats: Optional dictionary of column specific formats. The key is the column name,
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The value is either the format for the data column (such as 'string' for a UUID column) or a
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second level "format" dictionary of a ClickHouse type name and a value of query formats. This
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secondary dictionary can be used for nested column types such as Tuples or Maps
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:param encoding: Optional string encoding for this query, such as 'latin-1'
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:param column_formats: Optional dictionary
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:param use_none: Use a Python None for ClickHouse NULL values in nullable columns. Otherwise the default
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value of the column (such as 0 for numbers) will be returned in the result_set
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:param max_str_len Limit returned ClickHouse String values to this length, which allows a Numpy
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structured array even with ClickHouse variable length String columns. If 0, Numpy arrays for
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String columns will always be object arrays
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:param query_tz Either a string IANA timezone name or a tzinfo object (strings are resolved via zoneinfo).
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Values for any DateTime or DateTime64 column in the query will be converted to Python datetime.datetime
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objects with the selected timezone
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:param column_tzs A dictionary of column names to tzinfo objects (or strings that will be converted to
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tzinfo objects). The timezone will be applied to datetime objects returned in the query
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:param tz_mode Controls timezone-aware behavior for UTC DateTime columns. "naive_utc" (default) returns
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naive UTC timestamps. "aware" forces timezone-aware UTC datetimes. "schema" returns datetimes that
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match the server's column definition which means timezone-aware when the column schema defines a timezone
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(e.g. DateTime('UTC')) and naive for bare DateTime columns.
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"""
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super().__init__(
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settings,
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query_formats,
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column_formats,
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encoding,
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use_extended_dtypes if use_extended_dtypes is not None else False,
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use_numpy if use_numpy is not None else False,
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transport_settings=transport_settings,
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)
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self.query = query
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self.parameters = parameters or {}
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self.use_none = True if use_none is None else use_none
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self.column_oriented = False if column_oriented is None else column_oriented
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self.use_numpy = use_numpy
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self.max_str_len = 0 if max_str_len is None else max_str_len
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self.server_tz = server_tz
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self.apply_server_tz = apply_server_tz
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self.external_data = external_data
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self.tz_mode = tz_mode if tz_mode is not None else "naive_utc"
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if self.tz_mode not in _VALID_TZ_MODES:
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raise ProgrammingError(f'tz_mode must be "naive_utc", "aware", or "schema", got "{self.tz_mode}"')
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if isinstance(query_tz, str):
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try:
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query_tz = tzutil.resolve_zone(query_tz)
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except ZoneInfoNotFoundError as ex:
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raise ProgrammingError(f"query_tz {query_tz} is not recognized; {tzutil.TZDATA_HINT}") from ex
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self.query_tz = query_tz
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if column_tzs is not None:
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resolved_column_tzs = {}
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for col_name, col_tz in column_tzs.items():
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if isinstance(col_tz, str):
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try:
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resolved_column_tzs[col_name] = tzutil.resolve_zone(col_tz)
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except ZoneInfoNotFoundError as ex:
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raise ProgrammingError(f"column_tz {col_tz} is not recognized; {tzutil.TZDATA_HINT}") from ex
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else:
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resolved_column_tzs[col_name] = col_tz
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column_tzs = resolved_column_tzs
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self.column_tzs = column_tzs
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self.column_tz = None
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self.response_tz = None
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self.block_info = False
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self.as_pandas = as_pandas
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self.streaming = streaming
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self._rename_response_column: str | None = rename_response_column
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self.column_renamer = get_rename_method(rename_response_column)
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self._update_query()
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@property
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def rename_response_column(self) -> str | None:
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return self._rename_response_column
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@rename_response_column.setter
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def rename_response_column(self, method: str | None):
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self._rename_response_column = method
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self.column_renamer = get_rename_method(method)
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@property
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def is_select(self) -> bool:
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return select_re.search(self.uncommented_query) is not None
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@property
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def has_limit(self) -> bool:
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return limit_re.search(self.uncommented_query) is not None
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@property
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def is_insert(self) -> bool:
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return insert_re.search(self.uncommented_query) is not None
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@property
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def is_command(self) -> bool:
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return command_re.search(self.uncommented_query) is not None
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def set_parameters(self, parameters: dict[str, Any]):
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self.parameters = parameters
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self._update_query()
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def set_parameter(self, key: str, value: Any):
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if not self.parameters:
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self.parameters = {}
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self.parameters[key] = value
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self._update_query()
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def set_response_tz(self, response_tz: tzinfo):
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self.response_tz = response_tz
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def start_column(self, name: str):
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super().start_column(name)
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if self.column_tzs and name in self.column_tzs:
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self.column_tz = self.column_tzs[name]
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else:
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self.column_tz = None
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def active_tz(self, datatype_tz: tzinfo | None):
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if self.tz_mode == "schema":
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return self.column_tz or datatype_tz
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if self.column_tz:
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active_tz = self.column_tz
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elif datatype_tz:
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active_tz = datatype_tz
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elif self.query_tz:
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active_tz = self.query_tz
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elif self.response_tz:
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active_tz = self.response_tz
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elif self.apply_server_tz:
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active_tz = self.server_tz
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else:
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active_tz = tzutil.local_tz
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if tzutil.is_utc_timezone(active_tz) and self.tz_mode == "naive_utc":
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return None
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return active_tz
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def updated_copy(
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self,
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query: str | bytes | None = None,
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parameters: dict[str, Any] | None = None,
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settings: dict[str, Any] | None = None,
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query_formats: dict[str, str] | None = None,
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column_formats: dict[str, str | dict[str, str]] | None = None,
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encoding: str | None = None,
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server_tz: tzinfo | None = None,
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use_none: bool | None = None,
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column_oriented: bool | None = None,
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use_numpy: bool | None = None,
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max_str_len: int | None = None,
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query_tz: str | tzinfo | None = None,
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column_tzs: dict[str, str | tzinfo] | None = None,
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use_extended_dtypes: bool | None = None,
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as_pandas: bool = False,
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streaming: bool = False,
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external_data: ExternalData | None = None,
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transport_settings: dict[str, str] | None = None,
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rename_response_column: str | None = None,
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tz_mode: TzMode | None = None,
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) -> "QueryContext":
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"""
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Creates Query context copy with parameters overridden/updated as appropriate.
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"""
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resolved_tz_mode = tz_mode if tz_mode is not None else self.tz_mode
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return QueryContext(
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query=query or self.query,
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parameters=dict_copy(self.parameters, parameters),
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settings=dict_copy(self.settings, settings),
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query_formats=dict_copy(self.query_formats, query_formats),
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column_formats=dict_copy(self.column_formats, column_formats),
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encoding=encoding if encoding else self.encoding,
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server_tz=server_tz if server_tz else self.server_tz,
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use_none=self.use_none if use_none is None else use_none,
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column_oriented=self.column_oriented if column_oriented is None else column_oriented,
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use_numpy=self.use_numpy if use_numpy is None else use_numpy,
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max_str_len=self.max_str_len if max_str_len is None else max_str_len,
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query_tz=self.query_tz if query_tz is None else query_tz,
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column_tzs=self.column_tzs if column_tzs is None else column_tzs,
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tz_mode=resolved_tz_mode,
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use_extended_dtypes=self.use_extended_dtypes if use_extended_dtypes is None else use_extended_dtypes,
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as_pandas=as_pandas,
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streaming=streaming,
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apply_server_tz=self.apply_server_tz,
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external_data=self.external_data if external_data is None else external_data,
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transport_settings=self.transport_settings if transport_settings is None else transport_settings,
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rename_response_column=self.rename_response_column if rename_response_column is None else rename_response_column,
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)
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def _update_query(self):
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self.final_query, self.bind_params = bind_query(self.query, self.parameters, self.server_tz)
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if isinstance(self.final_query, bytes):
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# If we've embedded binary data in the query, all bets are off, and we check the original query for comments
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self.uncommented_query = remove_sql_comments(self.query)
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else:
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self.uncommented_query = remove_sql_comments(self.final_query)
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class QueryResult(Closable):
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"""
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Wrapper class for query return values and metadata
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"""
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def __init__(
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self,
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result_set: Matrix = None,
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block_gen: Generator[Matrix, None, None] = None,
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column_names: tuple[str, ...] = (),
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column_types: tuple["ClickHouseType", ...] = (),
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column_oriented: bool = False,
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source: Closable = None,
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query_id: str = None,
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summary: dict[str, Any] = None,
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):
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self._result_rows = result_set
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self._result_columns = None
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self._block_gen = block_gen or empty_gen()
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self._in_context = False
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self._query_id = query_id
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self.column_names = column_names
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self.column_types = column_types
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self.column_oriented = column_oriented
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self.source = source
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self.summary = {} if summary is None else summary
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@property
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def result_set(self) -> Matrix:
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if self.column_oriented:
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return self.result_columns
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return self.result_rows
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@property
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def result_columns(self) -> Matrix:
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if self._result_columns is None:
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# If rows are already materialized and stream is closed, transpose from rows
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# This happens when async client eagerly materializes result_rows
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if self._result_rows is not None and self._block_gen is None:
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if self._result_rows:
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self._result_columns = list(map(list, zip(*self._result_rows)))
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else:
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self._result_columns = [[] for _ in range(len(self.column_names))]
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else:
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result = [[] for _ in range(len(self.column_names))]
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with self.column_block_stream as stream:
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for block in stream:
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for base, added in zip(result, block):
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base.extend(added)
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self._result_columns = result
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return self._result_columns
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@property
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def result_rows(self) -> Matrix:
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if self._result_rows is None:
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result = []
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with self.row_block_stream as stream:
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for block in stream:
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result.extend(block)
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self._result_rows = result
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return self._result_rows
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@property
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def query_id(self) -> str:
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query_id = self.summary.get("query_id")
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if query_id:
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return query_id
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return self._query_id
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def _column_block_stream(self):
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if self._block_gen is None:
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raise StreamClosedError
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block_stream = self._block_gen
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self._block_gen = None
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return block_stream
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def _row_block_stream(self):
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for block in self._column_block_stream():
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yield list(zip(*block))
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@property
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def column_block_stream(self) -> StreamContext:
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return StreamContext(self, self._column_block_stream())
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@property
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def row_block_stream(self) -> StreamContext:
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return StreamContext(self, self._row_block_stream())
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@property
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def rows_stream(self) -> StreamContext:
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def stream():
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for block in self._row_block_stream():
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yield from block
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return StreamContext(self, stream())
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def named_results(self) -> Generator[dict, None, None]:
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for row in zip(*self.result_set) if self.column_oriented else self.result_set:
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yield dict(zip(self.column_names, row))
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@property
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def row_count(self) -> int:
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if self.column_oriented:
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return 0 if len(self.result_set) == 0 else len(self.result_set[0])
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return len(self.result_set)
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@property
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def first_item(self) -> dict[str, Any]:
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if self.column_oriented:
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return {name: col[0] for name, col in zip(self.column_names, self.result_set)}
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return dict(zip(self.column_names, self.result_set[0]))
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@property
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def first_row(self) -> Sequence[Any]:
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if self.column_oriented:
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return [col[0] for col in self.result_set]
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return self.result_set[0]
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def close(self) -> None:
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if self.source:
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self.source.close()
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self.source = None
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if self._block_gen is not None:
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self._block_gen.close()
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self._block_gen = None
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comment_re = re.compile(r"(\".*?\"|\'.*?\')|(/\*.*?\*/|(--\s)[^\n]*$)", re.MULTILINE | re.DOTALL)
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def remove_sql_comments(sql: str) -> str:
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"""
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Remove SQL comments. This is useful to determine the type of SQL query, such as SELECT or INSERT, but we
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don't fully trust it to correctly ignore weird quoted strings, and other edge cases, so we always pass the
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original SQL to ClickHouse (which uses a full-fledged AST/ token parser)
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:param sql: SQL query
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:return: SQL Query without SQL comments
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"""
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def replacer(match):
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# if the 2nd group (capturing comments) is not None, it means we have captured a
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# non-quoted, actual comment string, so return nothing to remove the comment
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if match.group(2):
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return ""
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# Otherwise we've actually captured a quoted string, so return it
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return match.group(1)
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return comment_re.sub(replacer, sql)
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def to_arrow(content: bytes):
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pyarrow = check_arrow()
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reader = pyarrow.ipc.RecordBatchFileReader(content)
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return reader.read_all()
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def to_arrow_batches(buffer: IOBase) -> StreamContext:
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pyarrow = check_arrow()
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reader = pyarrow.ipc.open_stream(buffer)
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return StreamContext(buffer, reader)
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def arrow_buffer(table, compression: str | None = None) -> tuple[Sequence[str], bytes | BinaryIO]:
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pyarrow = check_arrow()
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write_options = None
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if compression in ("zstd", "lz4"):
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write_options = pyarrow.ipc.IpcWriteOptions(compression=pyarrow.Codec(compression=compression))
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sink = pyarrow.BufferOutputStream()
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with pyarrow.RecordBatchFileWriter(sink, table.schema, options=write_options) as writer:
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writer.write(table)
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return table.schema.names, sink.getvalue()
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