Files
graph/tok/hnsw/ef_recall_test.go
zeekay f5aaeb712e Hanzo Graph — the engine, on zapdb, ZAP-native
Derived from Dgraph (github.com/dgraph-io/dgraph) at commit 64804bd2, Apache-2.0.
See NOTICE.

WHAT THIS IS. The graph engine as a Go library: posting lists, the DQL parser,
the type and tokenizer system, the index and schema layers, and the wire types.
39,170 lines of the upstream's 166,337.

THE STORE is github.com/luxfi/zapdb, a Badger fork that kept the package name,
the subpackages (options, pb, y) and the API — Open, OpenManaged, DB, Options —
so the 74 import sites are aliased rather than rewritten.

THE CODEC is ZAP. zapdb serializes with ZAP, not protobuf: its pb package builds
the ZAP types by default and the protobuf ones only under `-tags grpc`, a path
that does not compile (table/builder.go calls pb.Marshal, which that tag
removes). One call site in posting needed converting; every other type here is
Hanzo's own protobuf and is untouched.

NO TRANSPORT. An embedded engine dials nothing, so nothing here imports
google.golang.org/grpc. Removed: 20 transport functions in x, the generated
service stubs for Raft, Zero and Worker (1,657 lines), and the JWT helper —
identity belongs to IAM. The core called none of them.

NOT KEPT: worker, conn, raftwal, the cluster commands, the GraphQL layer and the
test harnesses. `query`, the DQL execution engine, went with them because it
depends on worker; parsing DQL is available here, executing it is not.

The history of the upstream project lives at github.com/dgraph-io/dgraph. This
repository begins at the derivation because three quarters of that history
describes code this fork does not carry.
2026-08-20 21:26:27 -07:00

212 lines
6.7 KiB
Go

/*
* SPDX-FileCopyrightText: © 2017-2026 Istari Digital, Inc.
* SPDX-License-Identifier: Apache-2.0
*/
package hnsw
import (
"context"
"encoding/binary"
"math"
"testing"
"github.com/stretchr/testify/require"
"github.com/hanzoai/graph/tok/index"
opt "github.com/hanzoai/graph/tok/options"
"github.com/hanzoai/graph/x"
)
// memoryCache satisfies index.CacheType for synthetic tests.
type memoryCache struct {
data map[string][]byte
}
func (m *memoryCache) Get(key []byte) ([]byte, error) {
if val, ok := m.data[string(key)]; ok {
return val, nil
}
return nil, nil
}
func (m *memoryCache) Ts() uint64 { return 0 }
func (m *memoryCache) Find([]byte, func([]byte) bool) (uint64, error) { return 0, nil }
func float64ArrayAsBytes(v []float64) []byte {
buf := make([]byte, 8*len(v))
for i, f := range v {
binary.LittleEndian.PutUint64(buf[i*8:], math.Float64bits(f))
}
return buf
}
// Test that EfOverride widens the bottom-layer candidate set and improves recall on a tiny graph.
func TestHNSWSearchEfOverrideImprovesRecall(t *testing.T) {
ctx := context.Background()
factory := CreateFactory[float64](64)
options := opt.NewOptions()
options.SetOpt(MaxLevelsOpt, 2)
options.SetOpt(EfSearchOpt, 1)
options.SetOpt(MetricOpt, GetSimType[float64](Euclidean, 64))
predName := "ef_override_test_pred"
predWithNamespace := x.NamespaceAttr(x.RootNamespace, predName)
rawIdx, err := factory.Create(predWithNamespace, options, 64)
require.NoError(t, err)
// Use concrete type directly (same package) to set up a tiny synthetic graph.
ph, ok := rawIdx.(*persistentHNSW[float64])
require.True(t, ok)
require.Equal(t, predWithNamespace, ph.pred)
// Populate vectors in memory via cache data map keyed by DataKey.
vectors := map[uint64][]float64{
1: {0, 0, 10, 0}, // entry
100: {0, 0, 0.1, 0}, // true nearest to query
200: {0, 0, 3, 0}, // local minimum path
201: {0, 0, 3.2, 0},
}
data := make(map[string][]byte)
for uid, vec := range vectors {
key := string(DataKey(ph.pred, uid))
data[key] = float64ArrayAsBytes(vec)
}
// Set entry pointer to uid 1.
entryKey := string(DataKey(ph.vecEntryKey, 1))
data[entryKey] = Uint64ToBytes(1)
// Wire a small graph that requires wider search to find uid 100 from entry 1.
ph.nodeAllEdges[1] = [][]uint64{{}, {200, 201}}
ph.nodeAllEdges[200] = [][]uint64{{1}, {1}}
ph.nodeAllEdges[201] = [][]uint64{{1}, {100}}
ph.nodeAllEdges[100] = [][]uint64{{201}, {201}}
cache := &memoryCache{data: data}
query := []float64{0, 0, 0.12, 0}
// Narrow ef behaves like legacy path: returns uid 200 for k=1.
narrowOpts := index.VectorIndexOptions[float64]{}
narrow, err := ph.SearchWithOptions(ctx, cache, query, 1, narrowOpts)
require.NoError(t, err)
require.Equal(t, []uint64{200}, narrow)
// Wider ef surfaces the closer neighbor uid 100.
wideOpts := index.VectorIndexOptions[float64]{EfOverride: 4}
wide, err := ph.SearchWithOptions(ctx, cache, query, 1, wideOpts)
require.NoError(t, err)
require.Equal(t, []uint64{100}, wide)
}
// Test Euclidean distance_threshold filters out results with squared distance above threshold.
func TestHNSWDistanceThreshold_Euclidean(t *testing.T) {
ctx := context.Background()
factory := CreateFactory[float64](64)
options := opt.NewOptions()
options.SetOpt(MaxLevelsOpt, 1)
options.SetOpt(EfSearchOpt, 10)
options.SetOpt(MetricOpt, GetSimType[float64](Euclidean, 64))
pred := x.NamespaceAttr(x.RootNamespace, "thresh_pred_e")
rawIdx, err := factory.Create(pred, options, 64)
require.NoError(t, err)
ph := rawIdx.(*persistentHNSW[float64])
// Two vectors at known Euclidean distances from query.
// query q = (0,0), a=(0.6,0), b=(0.8,0)
// dist(q,a)=0.6, dist(q,b)=0.8
data := map[string][]byte{
string(DataKey(pred, 1)): float64ArrayAsBytes([]float64{0.6, 0}),
string(DataKey(pred, 2)): float64ArrayAsBytes([]float64{0.8, 0}),
string(DataKey(ph.vecEntryKey, 1)): Uint64ToBytes(1),
}
// Single-layer edges; ensure both are reachable from entry.
ph.nodeAllEdges[1] = [][]uint64{{1, 2}}
ph.nodeAllEdges[2] = [][]uint64{{1}}
cache := &memoryCache{data: data}
q := []float64{0, 0}
// With current internal Euclidean values, use thresholds directly in the metric domain.
// threshold 0.75: include uid 1 (0.6) and exclude uid 2 (0.8).
th := 0.75
res, err := ph.SearchWithOptions(ctx, cache, q, 10, index.VectorIndexOptions[float64]{
DistanceThreshold: &th,
EfOverride: 10,
})
require.NoError(t, err)
require.Equal(t, []uint64{1}, res)
// threshold 1.5 (>1) should include both neighbors and demonstrate we keep working in raw distance.
thHigh := 1.5
resHigh, err := ph.SearchWithOptions(ctx, cache, q, 10, index.VectorIndexOptions[float64]{
DistanceThreshold: &thHigh,
EfOverride: 10,
})
require.NoError(t, err)
require.ElementsMatch(t, []uint64{1, 2}, resHigh)
// threshold 0.6 includes uid 1 (distance 0.6) but excludes the rest (inclusive comparison).
thExact := 0.6
resExact, err := ph.SearchWithOptions(ctx, cache, q, 10, index.VectorIndexOptions[float64]{
DistanceThreshold: &thExact,
EfOverride: 10,
})
require.NoError(t, err)
require.Equal(t, []uint64{1}, resExact)
// threshold 0.5 should filter everything.
thLow := 0.5
resLow, err := ph.SearchWithOptions(ctx, cache, q, 10, index.VectorIndexOptions[float64]{
DistanceThreshold: &thLow,
EfOverride: 10,
})
require.NoError(t, err)
require.Empty(t, resLow)
}
// Test Cosine distance_threshold uses distance d = 1 - cosine_similarity.
func TestHNSWDistanceThreshold_Cosine(t *testing.T) {
ctx := context.Background()
factory := CreateFactory[float64](64)
options := opt.NewOptions()
options.SetOpt(MaxLevelsOpt, 1)
options.SetOpt(EfSearchOpt, 10)
options.SetOpt(MetricOpt, GetSimType[float64](Cosine, 64))
pred := x.NamespaceAttr(x.RootNamespace, "thresh_pred_c")
rawIdx, err := factory.Create(pred, options, 64)
require.NoError(t, err)
ph := rawIdx.(*persistentHNSW[float64])
// Query q is unit along x-axis.
// a is exact match (cos sim 1.0, distance 0.0)
// b is 36.87 degrees (~cos 0.8, distance 0.2)
data := map[string][]byte{
string(DataKey(pred, 1)): float64ArrayAsBytes([]float64{1, 0}),
string(DataKey(pred, 2)): float64ArrayAsBytes([]float64{0.8, 0.6}),
string(DataKey(ph.vecEntryKey, 1)): Uint64ToBytes(1),
}
ph.nodeAllEdges[1] = [][]uint64{{1, 2}}
ph.nodeAllEdges[2] = [][]uint64{{1}}
cache := &memoryCache{data: data}
q := []float64{1, 0}
// distance_threshold=0.1 should include uid 1 but exclude uid 2 (0.2 > 0.1)
th := 0.1
res, err := ph.SearchWithOptions(ctx, cache, q, 10, index.VectorIndexOptions[float64]{
DistanceThreshold: &th,
EfOverride: 10,
})
require.NoError(t, err)
require.Equal(t, []uint64{1}, res)
}