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Included open-source Accord.net library code natively to the solution given the deprecated state of that project. Accord.net will be supported inside Jube for own needs (such as upgrading to .Net 7+). Accord.net libraries modified to compile to .Net 6. Modified Accord.net libraries to better support Newtonsoft Json.net serialisation. Included annotations in the Accord.net libraries to house important dependency statistics. Serialised json can be used independently of Jube to recall a Neural Network. Removal of Binary Serializer totally as a precursor to the projects support of .Net 7+. Extensive bug fixing in crucial functions of Neural Network training and recall. While this part of the system remains in Alpha, it is substantially more fit for purpose.
133 lines
4.9 KiB
C#
133 lines
4.9 KiB
C#
// Accord Statistics Library
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// The Accord.NET Framework
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// http://accord-framework.net
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//
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// Copyright © César Souza, 2009-2017
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// cesarsouza at gmail.com
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//
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// This library is free software; you can redistribute it and/or
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// modify it under the terms of the GNU Lesser General Public
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// License as published by the Free Software Foundation; either
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// version 2.1 of the License, or (at your option) any later version.
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//
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// This library is distributed in the hope that it will be useful,
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// but WITHOUT ANY WARRANTY; without even the implied warranty of
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// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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// Lesser General Public License for more details.
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//
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// You should have received a copy of the GNU Lesser General Public
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// License along with this library; if not, write to the Free Software
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// Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
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//
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namespace Accord.Statistics.Models.Fields.Features
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{
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using System;
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using Accord.Statistics.Models.Fields.Functions;
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using Accord.Math;
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using Accord.Compat;
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/// <summary>
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/// State feature for Hidden Markov Model output class symbol probabilities.
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/// </summary>
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///
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[Serializable]
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public sealed class OutputFeature<T> : FeatureBase<T>, IFeature<T>
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{
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int classSymbol;
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/// <summary>
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/// Constructs a new output class symbol feature.
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/// </summary>
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///
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/// <param name="owner">The potential function to which this feature belongs.</param>
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/// <param name="factorIndex">The index of the potential factor to which this feature belongs.</param>
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/// <param name="classSymbol">The emission symbol.</param>
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///
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public OutputFeature(IPotentialFunction<T> owner, int factorIndex, int classSymbol)
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: base(owner, factorIndex)
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{
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this.classSymbol = classSymbol;
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}
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/// <summary>
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/// Computes the feature for the given parameters.
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/// </summary>
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///
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/// <param name="previousState">The previous state.</param>
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/// <param name="currentState">The current state.</param>
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/// <param name="observations">The observations.</param>
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/// <param name="observationIndex">The index of the current observation.</param>
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/// <param name="outputClass">The output class label for the sequence.</param>
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///
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public override double Compute(int previousState, int currentState, T[] observations,
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int observationIndex, int outputClass)
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{
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return (outputClass == classSymbol && previousState == -1) ? 1 : 0;
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}
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/// <summary>
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/// Computes the probability of occurrence of this
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/// feature given a sequence of observations.
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/// </summary>
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///
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/// <param name="fwd">The matrix of forward state probabilities.</param>
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/// <param name="bwd">The matrix of backward state probabilities.</param>
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/// <param name="x">The observation sequence.</param>
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/// <param name="y">The output class label for the sequence.</param>
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///
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/// <returns>The probability of occurrence of this feature.</returns>
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///
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public override double Marginal(double[,] fwd, double[,] bwd, T[] x, int y)
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{
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double likelihood = 0;
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int states = fwd.GetLength(1);
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for (int j = 0; j < states; j++)
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likelihood += fwd[x.Length - 1, j];
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return likelihood;
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}
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/// <summary>
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/// Computes the log-probability of occurrence of this
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/// feature given a sequence of observations.
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/// </summary>
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///
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/// <param name="lnFwd">The matrix of forward state log-probabilities.</param>
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/// <param name="lnBwd">The matrix of backward state log-probabilities.</param>
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/// <param name="x">The observation sequence.</param>
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/// <param name="y">The output class label for the sequence.</param>
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///
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/// <returns>The probability of occurrence of this feature.</returns>
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///
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public override double LogMarginal(double[,] lnFwd, double[,] lnBwd, T[] x, int y)
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{
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double logLikelihood = Double.NegativeInfinity;
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int states = lnFwd.GetLength(1);
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for (int j = 0; j < states; j++)
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logLikelihood = Special.LogSum(logLikelihood, lnFwd[x.Length - 1, j]);
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return logLikelihood;
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}
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/// <summary>
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/// Creates a new object that is a copy of the current instance.
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/// </summary>
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///
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/// <returns>
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/// A new object that is a copy of this instance.
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/// </returns>
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///
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public IFeature<T> Clone(IPotentialFunction<T> newOwner)
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{
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var clone = (OutputFeature<T>)MemberwiseClone();
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clone.Owner = newOwner;
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return clone;
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}
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}
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}
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