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* starting parquet support starting parquet support. some things are still todo: compaction, find trace by ID Co-Authored-By: Annanay Agarwal <[email protected]> Co-Authored-By: Martin Disibio <[email protected]> * add parquet reusable streaming block * Add parquet compaction * Add findTraceByID logic and parquet -> proto conversion Signed-off-by: Annanay <[email protected]> * Switch findtracebyid to readrow until we get SeekToRow working * Fix error handling in bufferedReaderAt. Add various instrumentation and log messages * Use jsonpb to roundtrip event attributes * Improve buffered reader when reading near end of file. More instrumentation and tidiness * Add totalBlockBytes instrumentation. Fix inspectedBytes instrumentation * parquet.FindTraceByID check bloom * Make compator flush on trace count until we get the row group size target working * Support maxDuration in parquet search * Correct attribute translation for array/kvlist Signed-off-by: Annanay <[email protected]> * extend roundtrip test Signed-off-by: Annanay <[email protected]> * Use default page buffer size * Fix size url param to be uint64 * Increase parquet searches to 1MB stripes * Add test for findtracebyid * make row group size configurable Signed-off-by: Annanay <[email protected]> * Record parquet footer size in block meta and short-circuit header/footer reads * Add tests for SubstringPredicate * Switch compaction to compact blocks of same version, use re-usable buffer in findtracebyid Signed-off-by: Annanay <[email protected]> * Add search support for remaining well-known attributes and span status, add search tests * Benchmark substringPredicate * Make block version configurable, default to v2 * memoize substringPredicate * Update segmentio/parquet-go to catch SeekToRow fix, revert hack in FindTraceByID Signed-off-by: Annanay <[email protected]> * Add multi block prefetch iterator for use in compactor Signed-off-by: Annanay <[email protected]> * Add BufferedWriter with outgoing queue to flush traces async Signed-off-by: Annanay <[email protected]> Make compactor block complete async Signed-off-by: Annanay <[email protected]> * First pass CLI to dump schema and column sizes from block Signed-off-by: Annanay <[email protected]> * honor search start/end time range * Improve error message, add blockID Signed-off-by: Annanay <[email protected]> * Fix race in InstrumentedPredicate with atomics * Make bufferedReaderAt not single-threaded * Debug SeekToRow panic, add test data from vulture tenant Signed-off-by: Annanay <[email protected]> * fix test * repair tests * Address println warnings * Experiment with bookmark prefetch Signed-off-by: Annanay <[email protected]> Remove quitCh from bookmark Signed-off-by: Annanay <[email protected]> * fix prefetch on the bookmarks Signed-off-by: Annanay <[email protected]> * lint * tracker -> RowNumber, lint * delete unused predicates * lint * lint * mod vendor * remove pool from buffered writer queue Signed-off-by: Annanay <[email protected]> * post merge cleanup Signed-off-by: Annanay <[email protected]> * Close quitCh instead of attempting to signal to it Signed-off-by: Annanay <[email protected]> * split multiblock and prefetch iterators, refactor around interface Signed-off-by: Annanay <[email protected]> * Split search into 2 phases to avoid loading traceid/display columns unless there is a match * Make columnIterator.SeekTo do something * update to catch segmentio/parquet-go#220 Signed-off-by: Annanay <[email protected]> * Fix column index to store entire 32-byte trace ID string. lint * Make parquet honor the adjusted start/end times that come from the wal * post merge cleanup: use compaction metric callbacks Signed-off-by: Annanay <[email protected]> * serverless sum/mods Signed-off-by: Annanay <[email protected]> * parquetquery predicates handle column index not present * Make parquet compaction really honor input block start/end times, add universal test at tempodb-level * parquet skip page indexes while searching to reduce latency on openfile * More testing around iterators and combiner Signed-off-by: Annanay <[email protected]> * Update to latest parquet lib to catch rle bitpack fix * Review feedback: LatestEncoding -> DefaultEncoding * Pass block footerSize through serverless * mod vendor for serverless * Fix tests * add blockID to error message in block iterator Signed-off-by: Annanay <[email protected]> * increase readvalues buffer, add more span instrumentation Signed-off-by: Annanay <[email protected]> * changelog and docs * Remove the use of async writer in vparquet compactor Signed-off-by: Annanay <[email protected]> Co-authored-by: Annanay Agarwal <[email protected]>
327 lines
9.7 KiB
Go
327 lines
9.7 KiB
Go
package brotli
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import "math"
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/* Copyright 2013 Google Inc. All Rights Reserved.
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Distributed under MIT license.
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See file LICENSE for detail or copy at https://opensource.org/licenses/MIT
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*/
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/* Computes the bit cost reduction by combining out[idx1] and out[idx2] and if
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it is below a threshold, stores the pair (idx1, idx2) in the *pairs queue. */
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func compareAndPushToQueueLiteral(out []histogramLiteral, cluster_size []uint32, idx1 uint32, idx2 uint32, max_num_pairs uint, pairs []histogramPair, num_pairs *uint) {
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var is_good_pair bool = false
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var p histogramPair
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p.idx2 = 0
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p.idx1 = p.idx2
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p.cost_combo = 0
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p.cost_diff = p.cost_combo
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if idx1 == idx2 {
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return
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}
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if idx2 < idx1 {
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var t uint32 = idx2
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idx2 = idx1
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idx1 = t
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}
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p.idx1 = idx1
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p.idx2 = idx2
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p.cost_diff = 0.5 * clusterCostDiff(uint(cluster_size[idx1]), uint(cluster_size[idx2]))
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p.cost_diff -= out[idx1].bit_cost_
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p.cost_diff -= out[idx2].bit_cost_
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if out[idx1].total_count_ == 0 {
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p.cost_combo = out[idx2].bit_cost_
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is_good_pair = true
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} else if out[idx2].total_count_ == 0 {
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p.cost_combo = out[idx1].bit_cost_
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is_good_pair = true
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} else {
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var threshold float64
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if *num_pairs == 0 {
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threshold = 1e99
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} else {
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threshold = brotli_max_double(0.0, pairs[0].cost_diff)
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}
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var combo histogramLiteral = out[idx1]
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var cost_combo float64
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histogramAddHistogramLiteral(&combo, &out[idx2])
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cost_combo = populationCostLiteral(&combo)
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if cost_combo < threshold-p.cost_diff {
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p.cost_combo = cost_combo
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is_good_pair = true
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}
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}
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if is_good_pair {
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p.cost_diff += p.cost_combo
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if *num_pairs > 0 && histogramPairIsLess(&pairs[0], &p) {
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/* Replace the top of the queue if needed. */
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if *num_pairs < max_num_pairs {
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pairs[*num_pairs] = pairs[0]
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(*num_pairs)++
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}
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pairs[0] = p
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} else if *num_pairs < max_num_pairs {
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pairs[*num_pairs] = p
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(*num_pairs)++
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}
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}
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}
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func histogramCombineLiteral(out []histogramLiteral, cluster_size []uint32, symbols []uint32, clusters []uint32, pairs []histogramPair, num_clusters uint, symbols_size uint, max_clusters uint, max_num_pairs uint) uint {
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var cost_diff_threshold float64 = 0.0
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var min_cluster_size uint = 1
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var num_pairs uint = 0
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{
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/* We maintain a vector of histogram pairs, with the property that the pair
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with the maximum bit cost reduction is the first. */
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var idx1 uint
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for idx1 = 0; idx1 < num_clusters; idx1++ {
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var idx2 uint
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for idx2 = idx1 + 1; idx2 < num_clusters; idx2++ {
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compareAndPushToQueueLiteral(out, cluster_size, clusters[idx1], clusters[idx2], max_num_pairs, pairs[0:], &num_pairs)
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}
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}
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}
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for num_clusters > min_cluster_size {
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var best_idx1 uint32
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var best_idx2 uint32
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var i uint
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if pairs[0].cost_diff >= cost_diff_threshold {
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cost_diff_threshold = 1e99
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min_cluster_size = max_clusters
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continue
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}
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/* Take the best pair from the top of heap. */
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best_idx1 = pairs[0].idx1
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best_idx2 = pairs[0].idx2
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histogramAddHistogramLiteral(&out[best_idx1], &out[best_idx2])
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out[best_idx1].bit_cost_ = pairs[0].cost_combo
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cluster_size[best_idx1] += cluster_size[best_idx2]
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for i = 0; i < symbols_size; i++ {
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if symbols[i] == best_idx2 {
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symbols[i] = best_idx1
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}
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}
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for i = 0; i < num_clusters; i++ {
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if clusters[i] == best_idx2 {
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copy(clusters[i:], clusters[i+1:][:num_clusters-i-1])
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break
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}
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}
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num_clusters--
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{
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/* Remove pairs intersecting the just combined best pair. */
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var copy_to_idx uint = 0
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for i = 0; i < num_pairs; i++ {
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var p *histogramPair = &pairs[i]
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if p.idx1 == best_idx1 || p.idx2 == best_idx1 || p.idx1 == best_idx2 || p.idx2 == best_idx2 {
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/* Remove invalid pair from the queue. */
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continue
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}
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if histogramPairIsLess(&pairs[0], p) {
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/* Replace the top of the queue if needed. */
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var front histogramPair = pairs[0]
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pairs[0] = *p
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pairs[copy_to_idx] = front
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} else {
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pairs[copy_to_idx] = *p
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}
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copy_to_idx++
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}
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num_pairs = copy_to_idx
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}
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/* Push new pairs formed with the combined histogram to the heap. */
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for i = 0; i < num_clusters; i++ {
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compareAndPushToQueueLiteral(out, cluster_size, best_idx1, clusters[i], max_num_pairs, pairs[0:], &num_pairs)
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}
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}
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return num_clusters
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}
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/* What is the bit cost of moving histogram from cur_symbol to candidate. */
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func histogramBitCostDistanceLiteral(histogram *histogramLiteral, candidate *histogramLiteral) float64 {
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if histogram.total_count_ == 0 {
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return 0.0
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} else {
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var tmp histogramLiteral = *histogram
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histogramAddHistogramLiteral(&tmp, candidate)
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return populationCostLiteral(&tmp) - candidate.bit_cost_
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}
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}
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/* Find the best 'out' histogram for each of the 'in' histograms.
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When called, clusters[0..num_clusters) contains the unique values from
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symbols[0..in_size), but this property is not preserved in this function.
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Note: we assume that out[]->bit_cost_ is already up-to-date. */
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func histogramRemapLiteral(in []histogramLiteral, in_size uint, clusters []uint32, num_clusters uint, out []histogramLiteral, symbols []uint32) {
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var i uint
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for i = 0; i < in_size; i++ {
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var best_out uint32
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if i == 0 {
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best_out = symbols[0]
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} else {
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best_out = symbols[i-1]
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}
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var best_bits float64 = histogramBitCostDistanceLiteral(&in[i], &out[best_out])
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var j uint
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for j = 0; j < num_clusters; j++ {
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var cur_bits float64 = histogramBitCostDistanceLiteral(&in[i], &out[clusters[j]])
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if cur_bits < best_bits {
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best_bits = cur_bits
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best_out = clusters[j]
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}
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}
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symbols[i] = best_out
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}
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/* Recompute each out based on raw and symbols. */
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for i = 0; i < num_clusters; i++ {
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histogramClearLiteral(&out[clusters[i]])
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}
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for i = 0; i < in_size; i++ {
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histogramAddHistogramLiteral(&out[symbols[i]], &in[i])
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}
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}
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/* Reorders elements of the out[0..length) array and changes values in
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symbols[0..length) array in the following way:
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* when called, symbols[] contains indexes into out[], and has N unique
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values (possibly N < length)
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* on return, symbols'[i] = f(symbols[i]) and
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out'[symbols'[i]] = out[symbols[i]], for each 0 <= i < length,
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where f is a bijection between the range of symbols[] and [0..N), and
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the first occurrences of values in symbols'[i] come in consecutive
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increasing order.
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Returns N, the number of unique values in symbols[]. */
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var histogramReindexLiteral_kInvalidIndex uint32 = math.MaxUint32
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func histogramReindexLiteral(out []histogramLiteral, symbols []uint32, length uint) uint {
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var new_index []uint32 = make([]uint32, length)
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var next_index uint32
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var tmp []histogramLiteral
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var i uint
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for i = 0; i < length; i++ {
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new_index[i] = histogramReindexLiteral_kInvalidIndex
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}
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next_index = 0
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for i = 0; i < length; i++ {
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if new_index[symbols[i]] == histogramReindexLiteral_kInvalidIndex {
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new_index[symbols[i]] = next_index
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next_index++
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}
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}
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/* TODO: by using idea of "cycle-sort" we can avoid allocation of
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tmp and reduce the number of copying by the factor of 2. */
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tmp = make([]histogramLiteral, next_index)
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next_index = 0
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for i = 0; i < length; i++ {
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if new_index[symbols[i]] == next_index {
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tmp[next_index] = out[symbols[i]]
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next_index++
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}
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symbols[i] = new_index[symbols[i]]
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}
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new_index = nil
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for i = 0; uint32(i) < next_index; i++ {
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out[i] = tmp[i]
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}
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tmp = nil
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return uint(next_index)
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}
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func clusterHistogramsLiteral(in []histogramLiteral, in_size uint, max_histograms uint, out []histogramLiteral, out_size *uint, histogram_symbols []uint32) {
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var cluster_size []uint32 = make([]uint32, in_size)
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var clusters []uint32 = make([]uint32, in_size)
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var num_clusters uint = 0
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var max_input_histograms uint = 64
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var pairs_capacity uint = max_input_histograms * max_input_histograms / 2
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var pairs []histogramPair = make([]histogramPair, (pairs_capacity + 1))
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var i uint
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/* For the first pass of clustering, we allow all pairs. */
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for i = 0; i < in_size; i++ {
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cluster_size[i] = 1
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}
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for i = 0; i < in_size; i++ {
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out[i] = in[i]
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out[i].bit_cost_ = populationCostLiteral(&in[i])
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histogram_symbols[i] = uint32(i)
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}
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for i = 0; i < in_size; i += max_input_histograms {
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var num_to_combine uint = brotli_min_size_t(in_size-i, max_input_histograms)
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var num_new_clusters uint
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var j uint
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for j = 0; j < num_to_combine; j++ {
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clusters[num_clusters+j] = uint32(i + j)
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}
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num_new_clusters = histogramCombineLiteral(out, cluster_size, histogram_symbols[i:], clusters[num_clusters:], pairs, num_to_combine, num_to_combine, max_histograms, pairs_capacity)
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num_clusters += num_new_clusters
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}
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{
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/* For the second pass, we limit the total number of histogram pairs.
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After this limit is reached, we only keep searching for the best pair. */
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var max_num_pairs uint = brotli_min_size_t(64*num_clusters, (num_clusters/2)*num_clusters)
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if pairs_capacity < (max_num_pairs + 1) {
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var _new_size uint
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if pairs_capacity == 0 {
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_new_size = max_num_pairs + 1
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} else {
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_new_size = pairs_capacity
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}
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var new_array []histogramPair
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for _new_size < (max_num_pairs + 1) {
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_new_size *= 2
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}
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new_array = make([]histogramPair, _new_size)
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if pairs_capacity != 0 {
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copy(new_array, pairs[:pairs_capacity])
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}
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pairs = new_array
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pairs_capacity = _new_size
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}
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/* Collapse similar histograms. */
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num_clusters = histogramCombineLiteral(out, cluster_size, histogram_symbols, clusters, pairs, num_clusters, in_size, max_histograms, max_num_pairs)
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}
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pairs = nil
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cluster_size = nil
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/* Find the optimal map from original histograms to the final ones. */
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histogramRemapLiteral(in, in_size, clusters, num_clusters, out, histogram_symbols)
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clusters = nil
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/* Convert the context map to a canonical form. */
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*out_size = histogramReindexLiteral(out, histogram_symbols, in_size)
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}
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